Background
Materials and methods
Donor inclusion
Post-mortem in-situ MRI acquisition
Fig. 1 Workflow. After donor inclusion, post-mortem in-situ 3DT1 and DTI were collected [34], from which cortical thickness was derived with Freesurfer [41] and free-water corrected cortical mean diffusivity (FWC-MD) was derived with FSL [44], DIPY [47,48] and Freesurfer [41] (purple box). After the MRI scan, autopsy was performed, and 9 cortical regions were selected from the right hemisphere (RH) for further analysis. To match these regions to the MR images, regions of interest were selected from the Lausanne atlas [42,43] (yellow box). Brain tissue was processed for immunohistochemistry against phosphorylated Ser129 α-synuclein (pSer129-αSyn, clone EP1536Y), phosphorylated-tau (p-tau, clone AT8), amyloid β (Aβ, clone 4G8), neurofilament light chain (NfL, amino acid sequence 1-376) and phosphorylated neurofilaments medium and heavy chains (p-NfM/H, clone SMI312), which were quantified using QuPath [50]. The correlations between neurofilament immunoreactivity and pathology load, and between neurofilament immunoreactivity and MRI outcome measures were investigated via linear mixed models (yellow and purple dashed arrows, respectively). Aβ: amyloid beta; FWC-MD: free water corrected mean diffusivity; IHC: immunohistochemistry; LB: Lewy Body; NfL: neurofilament light chain; pSer129-αSyn: phosphorylated Ser129 alpha synuclein; p-NfM/H: phosphorylated neurofilament medium and heavy chain; p-tau: phosphorylated tau; RH: right hemisphere |
MRI analysis
Cortical thickness and brain volume assessment
Diffusion tensor imaging (DTI) pre-processing and free water correction
Tissue sampling
IHC for quantification
Pathological analysis
Pathology image processing
Multi-label immunofluorescence and confocal microscopy for morphological characterisation of neurofilaments
Statistics
Results
Cohort description
Table 1 Donor's characteristics |
| Control | PD | PDD/DLB | |
|---|---|---|---|
| N | 18 | 9 | 12 (7 PDD, 5 DLB) |
| Sex M/F (%M) | 8/10 (44%) | 6/3 (67%) | 7/5 (58%) |
| Age at diagnosis (years), mean ± SD | - | 62 ± 7 | 68 ± 12 |
| Disease duration (years), mean ± SD | - | 18 ± 5 | 11 ± 6ϮϮ |
| Age at death (years), mean ± SD | 73 ± 8 | 80 ± 9 | 78 ± 9 |
| Post-mortem delay (minutes), mean ± SD | 524 ± 110 | 469 ± 153 | 443 ± 107 |
| Radiologic characteristics | |||
| NBV (L) mean ± SD | 1.46 ± 0.07 | 1.43 ± 0.08 | 1.38 ± 0.07* |
| NGMV (L) mean ± SD | 0.74 ± 0.05 | 0.72 ± 0.04 | 0.70 ± 0.04* |
| NWMV (L) mean ± SD | 0.72 ± 0.03 | 0.72 ± 0.05 | 0.68 ± 0.04 |
| Pathological characteristics | |||
| Braak LB stage [55] N | 18 | 9*** | 12*** |
| 0/1/2/3/4/5/6 | 15/2/1/0/0/0/0 | 0/0/0/0/1/1/7 | 0/0/0/0/0/0/12 |
| ABC score [56] N | 18 | 9 | 12 |
| A 0/1/2/3 | 4/13/1/0 | 1/6/2/0 | 0/3/5/4** |
| B 0/1/2/3 | 3/15/0/0 | 0/7/2/0 | 0/5/7/0** |
| C 0/1/2/3 | 18/0/0/0 | 7/2/0/0 | 5/1/6/0** |
| Thal phase [52] N | 18 | 9 | 12** |
| 0/1/2/3/4/5 | 4/8/5/1/0/0 | 1/3/3/2/0/0 | 0/2/1/5/3/1 |
| Braak NFT stage [51] N | 18 | 9 | 12*** |
| 0/1/2/3/4/5/6 | 3/11/4/0/0/0/0 | 0/2/5/1/1/0/0 | 0/0/5/2/5/0/0 |
| CAA type [57] N | 18 | 9 | 12 |
| No CAA/type 1/ type 2 | 14/1/3 | 9/0/0 | 5/4/3 |
Data are mean ± standard deviation (SD). CAA: cerebral amyloid angiopathy; DLB: dementia with Lewy bodies; F: females; LB: Lewy body; M: males; NBV: normalized brain volume; NFT: neurofibrillary tangles; NGMV: normalized grey matter volume; NWMV: normalized white matter volume; PD: Parkinson's disease; PDD: Parkinson's disease dementia; SD: standard deviation. *P < 0.05, **P < 0.01, ***P < 0.001 when compared to controls, and ϮϮP < 0.01 when compared to the PD group |
Increase in neurofilament immunoreactivity in the cortex of PD and PDD/DLB
Fig. 2 Cortical neurofilament immunoreactivity (IR) and distribution across cortical brain regions. (a, c) Cortical p-NfM/H and (b, d) NfL immunoreactivity are shown for controls, PD and PDD/DLB groups. The first row (a, b) shows the overall neurofilament immunoreactivity across all cortical regions examined, with percentage differences compared to controls indicated at the top of the graph; every data point represents the averaged neurofilament immunoreactivity across all cortical regions of a donor, and the clinical groups are indicated by shapes, showing that PDD and DLB donors behaved similarly. Moreover, images of p-NfM/H (a) and NfL stainings (b) show that p-NfM/H targets the axons, while NfL targets both the neuronal soma and its processes. The second row (c and d) shows the regional neurofilament immunoreactivity in the 7 cortical regions analysed. Percentage differences (c) between p-NfM/H immunoreactivity in PD vs controls and (d) between NfL immunoreactivity in PDD/DLB vs controls are shown for brain areas hosting a significant difference. From these data, we can infer that p-NfM/H was uniformly increased across the cortical areas analysed in both PD and PDD/DLB, while NfL was increased specifically in the entorhinal and parahippocampal cortex in PDD/DLB. *P < 0.05, **P < 0.01, ***P < 0.001 when compared to controls. ACC: anterior cingulate cortex; AI: anterior insula; DLB: Dementia with Lewy Bodies; ENTC: entorhinal cortex; FUSG: fusiform gyrus; IR: immunoreactivity; MTG: middle temporal gyrus; NfL: neurofilament light chain; PHG: parahippocampal gyrus; PD: Parkinson's disease; PDD: Parkinson's disease dementia; p-NfM/H: phosphorylated neurofilament medium and heavy chain; SFG: superior frontal gyrus |
Accumulation and fragmentation of neurofilaments in diseased neurons in PDD/DLB
Fig. 3 NfL accumulation and fragmentation, and loss of neurofilament colocalization in PD and PDD/DLB. Maximum projections (Z-stacks, Z = 6 μm) of fluorescence stainings of NfL (red) and p-NfM/H (green) together with DAPI (blue) in the parahippocampal gyrus of a representative control (left, control number 10 in Additional file 1: Table S1), PD (middle, PD number 3 in Additional file 1: Table S1) and PDD/DLB (right, here a DLB donor, PDD/DLB number 12 in Additional file 1: Table S1) are shown. a-c show the difference in NfL staining pattern in control, PD and PDD/DLB, respectively. NfL markedly accumulated in neuronal somas and proximal axons in PDD/DLB cases, reflecting the higher NfL immunoreactivity described quantitatively in Fig. 2d. High NfL immunoreactivity was found in neuronal somas showing neurodegenerative morphological features, such as (c) neurons with nuclear fragmentation and swelling (*), and (d) corkscrew (**) and ballooned (***) appearances (panel d shows a zoom-in 3D surface-reconstruction of neurodegenerative neurons). Moreover, (c) NfL accumulation was also identified in a proximal axon showing fragmentation (arrow), closely tighten by a glial cell (#); e shows the zoom-in 3D surface-reconstruction of the white square in c, showing axonal fragmented morphology (arrow) and a glial cell wrapping the degenerating axon (#). f-h show the colocalization (yellow) of NfL and p-NfM/H in control, PD and PDD/DLB, respectively, which was reduced in PD and PDD/DLB. Moreover, accumulation and fragmentation of NfL staining patterns were observed in several axons, where (g) NfL seemed to fragment within a p-NfM/H axon in PD (dashed arrow) and (h) axonal swellings intermitted axonal fragmentations in PDD/DLB (arrows). i Zoom-in 3D surface-reconstruction of the white square in h, clearly showing fragmentation of the NfL-positive axon (arrows). DLB: Dementia with Lewy bodies; NfL: neurofilament light chain; PD: Parkinson's disease; PDD: Parkinson's disease dementia; p-NfM/H: phosphorylated neurofilament medium and heavy chain |
Cortical neurofilament immunoreactivity correlates with pathological staging
Cortical neurofilament immunoreactivity correlates with pSer129-αSyn load, and more strongly with p-tau load in PDD/DLB
Fig. 4 Cortical neurofilament immunoreactivity correlates with pSer129-αSyn and p-tau load. Correlation of (a and b) cortical p-NfM/H and (c and d) NfL immunoreactivity with pSer129-αSyn-positive LB count and p-tau load, respectively. Every data point represents a cortical region of a donor, and the groups are indicated by different colours. For each group, the regression line is shown, together with its colour-coded standard error (orange for controls, pink for PD and brown for PDD/DLB). Significant correlations are highlighted in bold red in the upper box in every panel. Legend: correlation significant at *P < 0.05, **P < 0.01, ***P < 0.001. DLB: Dementia with Lewy bodies; LB: Lewy Body; NfL: neurofilament light chain; PD: Parkinson's disease; PDD: Parkinson's disease dementia; p-NfM/H: phosphorylated neurofilament medium and heavy chain; p-tau: phosphorylated tau |
Cortical neurofilament immunoreactivity is reflected by MRI cortical thickness in PD
Fig. 5 Neurofilament immunoreactivity correlates with decreased cortical thickness in PD and increased cortical MD in PDD/DLB. (a, b) Correlation of cortical p-NfM/H and (c, d) NfL immunoreactivity with cortical thickness on the left, and cortical MD on the right. Immunoreactivity of both neurofilaments correlated with decreased cortical thickness, specifically in PD, and with higher cortical MD, specifically in PDD/DLB. Every data point represents a cortical region of interest of a donor, and the groups are indicated by colours in the figure. For each group, the regression line is shown, together with its colour-coded standard error (pink for PD and brown for PDD/DLB). Significant correlations are highlighted in red bold in every panel. Legend: correlation significant at *P < 0.05, **P < 0.01, ***P < 0.001. DLB: Dementia with Lewy bodies; FWC-MD: free-water corrected mean diffusivity; MD: mean diffusivity; NfL: neurofilament light chain; PD: Parkinson's disease; PDD: Parkinson's disease dementia; p-NfM/H: phosphorylated neurofilament medium and heavy chain |
Cortical neurofilament immunoreactivity is reflected by cortical diffusivity in PDD/DLB
Discussion
Fig. 6 Increased neurofilament immunoreactivity is associated with pathology load and MRI biomarkers of neurodegeneration in PD. Middle panel: neurofilament immunoreactivity is increased in both PD and PDD/DLB cortex. Specifically, increased NfM/H phosphorylation occurs across the cortex in both PD and PDD/DLB (blue square), possibly indicating axonal stress, and is associated with increased p-tau load (left panel, blue arrow). On the other hand, an increased NfL immunoreactivity, representing NfL accumulation in disease neurons and fragmented axons, is observed in the entorhinal cortex and parahippocampal gyrus of PDD/DLB donors (red square) and associated with LB count and p-tau load (left panel, red arrow), suggesting structural changes with increasing pathological burden, and confirming its important role in the context of cognitive decline. Right panel: both increased p-NfM/H (i.e. axonal stress) and NfL immunoreactivity (i.e. NfL accumulation and fragmentation) are reflected by cortical thinning in PD and increased cortical MD in PDD/DLB. Figure created with BioRender.com. DLB: Dementia with Lewy Bodies; LB: Lewy Body; NfL: neurofilament light chain; PD: Parkinson's disease; PDD: Parkinson's disease dementia; NfM/H: phosphorylated neurofilament medium and heavy chain; p-tau: phosphorylated tau |

