组织工程与重建外科杂志 ›› 2023, Vol. 19 ›› Issue (2): 115-.

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基于单细胞转录组测序结果分析成纤维细胞促进口腔黏膜无瘢痕愈合的机制

  

  • 出版日期:2023-04-01 发布日期:2023-05-09

Analysis of the mechanism of fibroblast involvement in scarless healing of oral mucosa based on single cell transcriptome sequencing

  • Online:2023-04-01 Published:2023-05-09

摘要:

 目的 探索人类正常口腔黏膜与皮肤的成纤维细胞异质性,以及口腔黏膜成纤维细胞促进伤口无瘢痕愈合
的机制。方法 从 GEO 数据库中获取 13 例口腔黏膜和 8 例皮肤的单细胞转录组测序数据。对整合后的 64 633 个细
胞进行质控、降维、聚类及细胞注释。提取成纤维细胞进行亚群定义,差异基因富集、细胞互作分析。结果 从 12
个细胞亚群中识别出成纤维细胞,并根据基因表达特征定义为 5 个功能亚群 :促炎型、调脂型、间充质型、收缩型
和 Wnt 抑制型。与皮肤相比,口腔黏膜中的促炎型成纤维细胞比例显著上调,且与免疫细胞招募相关。口腔黏膜成
纤维细胞高表达 CXCL13、EEF1A1 和 B2M 等基因。基因本体(GO)功能分析显示,口腔黏膜成纤维细胞中免疫应
答及促炎通路等瘢痕愈合相关通路被激活。细胞互作分析显示,成纤维细胞亚群间的互作模式显著改变,口腔黏膜
胶原信号通路激活的同时,包含 MMP1、MMP10 等基因的胶原降解基因集评分也显著上调(P<0.05)。结论 正常
皮肤与口腔黏膜中的成纤维细胞,其亚群、功能等存在显著差异,口腔黏膜成纤维细胞更强的促炎特性及胶原代谢
水平可能是伤口无瘢痕愈合的原因。

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Abstract:

Objective To explore the heterogeneity of human normal oral mucosa and skin fibroblasts and the mechanism of
oral mucosal fibroblasts in promoting scarless wound healing. Methods Single-cell transcriptome sequencing data were obtained
from the GEO database for 13 cases of oral mucosa and 8 cases of skin. The 64,633 cells were subjected to quality control, dimen sionality, clustering and cell annotation. Fibroblasts were extracted and annotated for subsets definition, differential gene enrichment
and intercellular interactions analysis. Results Fibroblasts can be divided into 5 subsets: inflammatory, adipose, mesenchymal,
contractile, and Wnt-inhibited. The proportion of inflammatory fibroblasts was significantly upregulated in the oral mucosa and
was associated with immune cell recruitment. CXCL13, EEF1A1 and B2M genes were highly expressed in oral mucosa fibro
blasts. Gene ontology (GO) functional analysis showed that scar healing-related pathways such as immune response and pro-in
flammatory pathways were activated in oral fibroblasts. Cellular interaction analysis revealed that the interaction between fibro
blast subsets was significantly changed, the information flow of oral mucosal COLLAGEN signaling pathway was upregulated, and
the score of collagen degradation genes including MMP1 and MMP10 were also increased (P<0.05). Conclusion Fibroblasts
in normal skin and oral mucosa differ significantly in their subpopulation and function. The stronger inflammatory characteristics
and collagen metabolism of oral mucosal fibroblasts may drive the scarless wound healing.

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